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Claudia Coronnello
Claudia Coronnello, PhD
PI in Advanced Data Analysis
ccoronnello@fondazionerimed.com

Biographical notes

Dr. Claudia Coronnello received her degree in Physics from Palermo University in 2002. In 2003-2004, she was appointed as “talented” young researcher at ISUFI, Lecce, working within the European Union project titled “Te.S.C.He.T – Technology System for Cultural Heritage and Tourism”. In 2005, she worked at the Palermo University within the European Union Strep project titled “Dysonet -Human behavior through dynamics of complex social networks: an interdisciplinary approach”. Dr. Claudia Coronnello received her PhD degree in Applied Physics by developing a project titled “Gene Ontology statistical analysis of complex diseases: methodological issues and application to Autism” at Palermo University in 2008.

In 2009 she was trained as Bioinformatician at Istituto Mediterraneo per i Trapianti e Terapie ad Alta Specializzazione (ISMETT) in Palermo, Italy within the PERFORMANCE Project. Since the end of 2009, she is part of the Ri.Med. Foundation team, being initially hosted in two different international research Institutions: in 2010-2012, she joined the Benos’ lab as postdoctoral Fellow in the Department of Computational and Systems Biology at the University of Pittsburgh; in 2013-2017, she joined the Giallongo’s lab, in the IRIB-CNR Institution in Palermo, Italy. Now, starting from 2018, she leads the Advanced Data Analysis group of the Ri.MED Foundation.

Scientifical activity

The focus of Dr. Coronnello’s current research is the microRNA activity from several points of view. She explores their function by unravelling the behavior of the RISC proteins, develops novel algorithms to efficiently predict microRNA targets and studies the biological interaction networks among microRNAs and their targets. Specifically, she analyzed transcriptomic data from immunoprecipitation (IP) of two RISC proteins (AGO2 and GW182), in order to understand their role in the microRNA function; she used differentially expressed genes in AGO2 IP and in AGO2 inhibited samples to train ComiR, a novel algorithm useful to predict the targets of a set of endogenous microRNAs; finally, she uses mRNA and microRNA expression profiles to reverse engineering the biological interactions among them.

Given that miRNAs are involved in cancer and other terminal diseases, her algorithms will provide valuable tools in the future in the analysis of clinical miRNA gene expression data. Dr. Coronnello is an expert in -omics data analysis, from raw data to results interpretation, and she shares her activity by developing data analysis workflows and algorithms, where results are obtained by merging information from different sources and experimental techniques. She is currently author of 35 papers published in peer reviewed scientific journals (Scopus h-index: 13).

Publications

Journal Paper
Caspase-8 activation by cigarette smoke induces pro-inflammatory cell death of human macrophages exposed to lipopolysaccharide
Marta Cristaldi , Marco Buscetta, PhD , Maura Cimino , Agnese La Mensa , Maria Rita Giuffrè , Luigi Fiore , Claudia Carcione , Fabio Bucchieri , Francesca Rappa , Claudia Coronnello, PhD , Nicolina Sciaraffa, PhD , Santina Amato , Tommaso Silvano Aronica , Giovanna Lo Iacono , Alessandro Bertani , Elisabetta Pace , Chiara Cipollina, PhD ,
Cell Death Dis, 2023 Nov 25;14(11):773.
https://doi.org/10.1038/s41419-023-06318-6
Journal Paper
miRNA expression analysis in the human heart: Undifferentiated progenitors vs. bioptic tissues—Implications for proliferation and ageing
Gioacchin Iannolo , Maria Rita Sciuto , Nicola Cuscino , Claudia Carcione , Claudia Coronnello, PhD , Cinzia Chinnici, Ph.D , Giuseppe Maria Raffa , Michele Pilato , Pier Giulio Conaldi
Journal of Cellular and Molecular Medicine25(18):8687-8700, 2021
https://doi.org/10.1111/jcmm.16824
Journal Paper
Usefulness of regional right ventricular and right atrial strain for prediction of early and late right ventricular failure following a left ventricular assist device implant: A machine learning approach
Diego Bellavia , Attilio Iacovoni , Valentina Agnese , Calogero Falletta , Claudia Coronnello, PhD , Salvatore Pasta , Giuseppina Novo , Gabriele di Gesaro , Michele Senni , Joseph Maalouf , Sergio Sciacca , Michele Pilato , Marc Simon , Francesco Clemenza , Sir John Gorcsan III
The International Journal of Artificial Organs 43(5): 297-314, 2020
https://doi.org/10.1177/0391398819884941
Journal Paper
Cross-talk between Colon Cells and Macrophages Increases ST6GALNAC1 and MUC1-sTn Expression in Ulcerative Colitis and Colitis-Associated Colon Cancer
Kvorjak M , Ahmed Y , Miller ML , Sriram R , Claudia Coronnello, PhD , Hashash JG , Hartman DJ , Telmer CA , Miskov-Zivanov N , Finn OJ , Cascio S *
Cancer Immunol Res. 2020 Feb;8(2):167-178. doi: 10.1158/2326-6066.CIR-19-0514. Epub 2019 Dec 12.
https://aacrjournals.org/cancerimmunolres/article/8/2/167/469841/Cross-talk-between-Colon-Cells-and-Macrophages
Journal Paper
On the prospect of serum exosomal miRNA profiling and protein biomarkers for the diagnosis of ascending aortic dilatation in patients with bicuspid and tricuspid aortic valve
Alessia Gallo , Valentina Agnese , Claudia Coronnello, PhD , Giuseppe M. Raffa , Diego Bellavia , Pier Giulio Conaldi , Michele Pilato , Salvatore Pasta
International Journal of Cardiology273:230-236, 2018
https://doi.org/10.1016/j.ijcard.2018.10.005
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